STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_3274PFAM: sugar transferase; KEGG: bur:Bcep18194_C7401 undecaprenyl-phosphate galactosephosphotransferase. (203 aa)    
Predicted Functional Partners:
Bphy_3733
Capsular exopolysaccharide family; KEGG: bam:Bamb_6487 hypothetical protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.986
Bphy_1061
Capsular exopolysaccharide family; KEGG: bxe:Bxe_A2242 protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.985
Bphy_2472
Exopolysaccharide transport protein family; KEGG: bxe:Bxe_A3864 exopolysaccharide export associated tyrosine kinase; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.984
Bphy_3276
Capsular exopolysaccharide family; KEGG: psa:PST_2493 tyrosine-protein kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.984
Bphy_3006
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bce:BC1209 O-antigen biosynthesis protein RfbC.
  
  
 0.972
Bphy_1056
KEGG: bxe:Bxe_A2248 mannose-1-phosphateguanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.966
Bphy_2283
KEGG: bxe:Bxe_A2514 mannose-1-phosphateguanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.966
Bphy_2293
KEGG: csa:Csal_1692 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.966
Bphy_2475
KEGG: bxe:Bxe_A3867 mannose-1-phosphateguanylyl transferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.966
Bphy_3725
KEGG: bxe:Bxe_B1730 mannose-1-phosphateguanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.966
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.