STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_3315PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_B1744 putative 2-hydroxyacid dehydrogenase. (310 aa)    
Predicted Functional Partners:
Bphy_3314
PFAM: OsmC family protein; KEGG: bte:BTH_II1006 OsmC/Ohr family protein.
     
 0.700
Bphy_3316
PFAM: protein of unknown function DUF1697; KEGG: bja:bll4334 hypothetical protein.
       0.536
Bphy_2604
PFAM: phosphate acetyl/butaryl transferase; malic protein domain protein; malic protein NAD-binding; KEGG: bxe:Bxe_A0557 malate dehydrogenase (oxaloacetate decarboxylating) (NADP+), phosphate acetyltransferase.
   
 
 0.434
Bphy_2869
PFAM: phosphate acetyl/butaryl transferase; malic protein domain protein; malic protein NAD-binding; KEGG: bxe:Bxe_A0283 malate dehydrogenase (oxaloacetatedecarboxylating) (NADP+), phosphate acetyltransferase; Belongs to the malic enzymes family.
   
 
 0.434
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 
 0.422
Bphy_2297
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: nmu:Nmul_A2404 NAD-dependent epimerase/dehydratase.
 
  
 0.418
Bphy_1734
PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_A2825 putative aromatic amino acid aminotransferase.
 
   
 0.415
Bphy_3317
PFAM: aldo/keto reductase; KEGG: smd:Smed_1260 aldo/keto reductase.
  
  
 0.406
Bphy_4316
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bvi:Bcep1808_3665 heavy metal translocating P-type ATPase.
 
   0.406
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.