STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_3418KEGG: bpe:BP0507 hypothetical protein. (174 aa)    
Predicted Functional Partners:
Bphy_3414
Phage-related protein predicted endonuclease-like protein; KEGG: bld:BLi01440 YqaJ.
  
    0.853
Bphy_3415
KEGG: oan:Oant_1553 hypothetical protein.
       0.790
Bphy_3416
Hypothetical protein.
       0.773
Bphy_3417
KEGG: shw:Sputw3181_2511 hypothetical protein.
       0.773
Bphy_3419
Hypothetical protein.
       0.773
Bphy_3420
Hypothetical protein.
       0.625
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.