Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bphy_0046 | Bphy_3613 | Bphy_0046 | Bphy_3613 | PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_A4404 2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family. | PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B4668 fumarylacetoacetate (FAA) hydrolase. | 0.404 |
Bphy_3612 | Bphy_3613 | Bphy_3612 | Bphy_3613 | KEGG: reu:Reut_B4671 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein. | PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B4668 fumarylacetoacetate (FAA) hydrolase. | 0.607 |
Bphy_3612 | frc | Bphy_3612 | Bphy_3614 | KEGG: reu:Reut_B4671 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein. | formyl-CoA transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. | 0.499 |
Bphy_3613 | Bphy_0046 | Bphy_3613 | Bphy_0046 | PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B4668 fumarylacetoacetate (FAA) hydrolase. | PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_A4404 2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.404 |
Bphy_3613 | Bphy_3612 | Bphy_3613 | Bphy_3612 | PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B4668 fumarylacetoacetate (FAA) hydrolase. | KEGG: reu:Reut_B4671 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein. | 0.607 |
Bphy_3613 | frc | Bphy_3613 | Bphy_3614 | PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B4668 fumarylacetoacetate (FAA) hydrolase. | formyl-CoA transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. | 0.641 |
Bphy_3613 | hmgA | Bphy_3613 | Bphy_2435 | PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B4668 fumarylacetoacetate (FAA) hydrolase. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.621 |
frc | Bphy_3612 | Bphy_3614 | Bphy_3612 | formyl-CoA transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. | KEGG: reu:Reut_B4671 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein. | 0.499 |
frc | Bphy_3613 | Bphy_3614 | Bphy_3613 | formyl-CoA transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. | PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B4668 fumarylacetoacetate (FAA) hydrolase. | 0.641 |
hmgA | Bphy_3613 | Bphy_2435 | Bphy_3613 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B4668 fumarylacetoacetate (FAA) hydrolase. | 0.621 |