STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_3832PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: bxe:Bxe_B0477 protein serine/threonine phosphatases. (256 aa)    
Predicted Functional Partners:
Bphy_1468
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bpm:BURPS1710b_2743 pyruvate dehydrogenase, E3 component, dihydrolipoamide dehydrogenase.
  
 0.971
Bphy_3843
PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bxe:Bxe_B0466 serine/threonine protein kinase.
 
 
 0.904
Bphy_3759
PFAM: Transketolase central region; Transketolase domain protein; KEGG: bxe:Bxe_B0314 acetoin dehydrogenase, beta subunit.
   
 0.840
Bphy_5184
KEGG: bvi:Bcep1808_5667 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
 0.815
Bphy_3831
KEGG: bxe:Bxe_B0478 hypothetical protein.
       0.789
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.741
Bphy_0924
PFAM: formyl transferase domain protein; KEGG: bxe:Bxe_A2388 putative transformylase protein.
  
   0.741
Bphy_3012
PFAM: formyl transferase domain protein; KEGG: bpa:BPP0128 putative formyl transferase.
  
   0.741
Bphy_3331
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: bch:Bcen2424_5149 sarcosine oxidase, alpha subunit family; Belongs to the GcvT family.
  
 0.737
Bphy_0039
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
 
 
 0.731
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.