Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Bphy_4100PFAM: DGPFAETKE family protein; KEGG: bxe:Bxe_B0231 hypothetical protein. (118 aa)    
Predicted Functional Partners:
Bphy_4097
Putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B0234 unknown sigma factor.
 
  
 0.894
Bphy_4099
PFAM: DGPFAETKE family protein; KEGG: bte:BTH_II0534 DGPF domain protein.
 
   
0.707
Bphy_4098
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B0233 putative glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.706
Bphy_1818
PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rle:RL1304 hypothetical protein.
 
    0.535
Bphy_4084
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rfr:Rfer_4026 glyoxalase/bleomycin resistance protein/dioxygenase.
 
    0.527
Bphy_4083
PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bxe:Bxe_A3278 putative 3-demethylubiquinone-93-methyltransferase protein.
 
    0.443
Bphy_2105
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: bxe:Bxe_A3319 hypothetical protein.
 
    0.440
Bphy_3708
PFAM: DGPFAETKE family protein; KEGG: reu:Reut_B3488 DGPFAETKE.
 
   
0.435
Bphy_2600
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A0562 putative glyoxalase/bleomycin resistance protein, dioxygenase superfamily.
 
    0.418
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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