STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_4132PFAM: toluene tolerance family protein; KEGG: bxe:Bxe_B0016 putative ABC transporter, periplasmic ligand binding protein. (201 aa)    
Predicted Functional Partners:
Bphy_2768
PFAM: Mammalian cell entry related domain protein; KEGG: bxe:Bxe_A0389 putative signal peptide protein, toluene tolerance Ttg2C-like.
 
 0.976
Bphy_2765
KEGG: bxe:Bxe_A0392 hypothetical protein.
  
 
 0.921
Bphy_2766
PFAM: toluene tolerance family protein; KEGG: bxe:Bxe_A0391 ABC transporter, periplasmic ligand binding protein, toluene tolerance Ttg2D-like.
  
  
 
0.906
Bphy_0207
PFAM: Mammalian cell entry related domain protein; KEGG: bxe:Bxe_A4223 ABC transporter, periplasmic ligand binding protein.
  
 0.904
Bphy_2769
PFAM: protein of unknown function DUF140; KEGG: bxe:Bxe_A0388 putative ABC transporter, inner membrane subunit, toluene tolerance Ttg2B-like.
 
 
 0.893
Bphy_2770
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0387 ABC transporter, ATPase subunit, toluene tolerance Ttg2A-like.
 
 
 0.877
Bphy_0206
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A4224 ABC transporter, ATPase subunit.
  
 
 0.844
Bphy_3497
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A2446 ABC transporter component.
  
 
 0.844
Bphy_0205
PFAM: protein of unknown function DUF140; KEGG: bxe:Bxe_A4225 putative ABC transporter, inner membrane subunit.
  
 
 0.839
Bphy_3498
PFAM: protein of unknown function DUF140; KEGG: rru:Rru_A2445 protein of unknown function DUF140.
  
 
 0.839
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.