STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_4601KEGG: bpd:BURPS668_A0079 hypothetical protein. (335 aa)    
Predicted Functional Partners:
Bphy_1673
PFAM: condensation domain protein; KEGG: rpa:RPA3338 possible condensation domain, peptide synthetase.
  
  
 0.694
Bphy_3756
PFAM: Di-haem cytochrome c peroxidase; KEGG: bch:Bcen2424_4344 di-haem cytochrome c peroxidase.
  
 
 0.653
Bphy_3812
KEGG: bur:Bcep18194_B0604 amine dehydrogenase; Belongs to the aromatic amine dehydrogenase light chain family.
   
 
 0.640
Bphy_0350
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: bxe:Bxe_A4075 putative cytochrome c precursor.
 
 
 0.524
Bphy_3250
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: bxe:Bxe_B1689 cytochrome c, class I.
 
 
 0.513
Bphy_5487
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: bxe:Bxe_C0083 putative alcohol dehydrogenase cytochrome c subunit.
 
 
 0.507
Bphy_4796
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: bxe:Bxe_C0171 putative cytochrome c, class I.
 
 
 0.506
Bphy_0126
PFAM: cytochrome c class I; KEGG: bxe:Bxe_A4310 putative cytochrome c, class I.
  
  
 0.502
Bphy_1140
KEGG: bte:BTH_II0457 cytochrome c family protein.
  
  
 0.502
Bphy_2222
PFAM: cytochrome c class I; KEGG: bxe:Bxe_A3635 putative cytochrome c, class I.
  
  
 0.502
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.