STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_4861TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP_4749 amino acid ABC transporter, permease protein. (219 aa)    
Predicted Functional Partners:
Bphy_4859
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppu:PP_4751 amino acid ABC transporter, ATP-binding protein.
 0.996
Bphy_4860
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP_4750 amino acid ABC transporter, permease protein.
 
  
 
0.982
Bphy_4862
PFAM: extracellular solute-binding protein family 3; KEGG: pfl:PFL_3548 amino acid ABC transporter, periplasmic amino acid-binding protein.
 
 0.962
Bphy_1156
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: reu:Reut_B3699 extracellular solute-binding protein, family 3.
 
 0.903
Bphy_2367
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_4341 ABC transporter related.
 
 0.863
Bphy_5107
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1822 ABC amino acid transporter, ATPase subunit.
 
 0.859
Bphy_5479
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_I1228 glutamate/aspartate ABC transporter, ATP-binding protein.
 
 0.856
Bphy_2570
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0600 ABC His/Glu/Gln/Arg/opine family transporter, ATPase subunit.
 
 0.855
Bphy_4555
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1061 ABC polar amino acid family transporter, ATPase subunit.
 
 0.853
Bphy_1154
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_B3697 ABC transporter related.
 
 0.851
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.