Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bphy_4316 | Bphy_5009 | Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bvi:Bcep1808_3665 heavy metal translocating P-type ATPase. | Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: psb:Psyr_4051 regulatory protein, ArsR. | 0.428 |
Bphy_5007 | Bphy_5008 | TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reu:Reut_B4490 acetolactate synthase, large subunit, biosynthetic type. | KEGG: rso:RSc2221 1-deoxy-D-xylulose-5-phosphate synthase. | 0.441 |
Bphy_5007 | Bphy_5009 | TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reu:Reut_B4490 acetolactate synthase, large subunit, biosynthetic type. | Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: psb:Psyr_4051 regulatory protein, ArsR. | 0.441 |
Bphy_5008 | Bphy_5007 | KEGG: rso:RSc2221 1-deoxy-D-xylulose-5-phosphate synthase. | TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reu:Reut_B4490 acetolactate synthase, large subunit, biosynthetic type. | 0.441 |
Bphy_5008 | Bphy_5009 | KEGG: rso:RSc2221 1-deoxy-D-xylulose-5-phosphate synthase. | Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: psb:Psyr_4051 regulatory protein, ArsR. | 0.779 |
Bphy_5009 | Bphy_4316 | Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: psb:Psyr_4051 regulatory protein, ArsR. | Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bvi:Bcep1808_3665 heavy metal translocating P-type ATPase. | 0.428 |
Bphy_5009 | Bphy_5007 | Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: psb:Psyr_4051 regulatory protein, ArsR. | TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reu:Reut_B4490 acetolactate synthase, large subunit, biosynthetic type. | 0.441 |
Bphy_5009 | Bphy_5008 | Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: psb:Psyr_4051 regulatory protein, ArsR. | KEGG: rso:RSc2221 1-deoxy-D-xylulose-5-phosphate synthase. | 0.779 |