STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_5154PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1357 major facilitator superfamily (MFS_1) transporter. (428 aa)    
Predicted Functional Partners:
Bphy_5155
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: reh:H16_A2758 altronate dehydratase.
 
     0.685
Bphy_5156
L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: csa:Csal_1075 (S)-2-hydroxy-acid oxidase.
  
    0.518
Bphy_5089
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1842 major facilitator superfamily (MFS)metabolite/H+ symporter.
  
     0.470
Bphy_5191
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bte:BTH_II1095 major facilitator family transporter.
  
     0.460
Bphy_4540
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5383 major facilitator superfamily MFS_1.
  
     0.429
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.