STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_5179TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bte:BTH_II1127 GGDEF domain protein. (504 aa)    
Predicted Functional Partners:
Bphy_3818
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: bxe:Bxe_B0796 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains).
  
 0.815
Bphy_1193
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: bxe:Bxe_B0499 putative diguanylate phosphodiesterase (EAL domain).
  
 0.812
Bphy_1744
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: bxe:Bxe_A2834 putative diguanylate phosphodiesterase (EAL domain).
  
 0.797
Bphy_0140
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: bxe:Bxe_A4292 putative diguanylate phosphodiesterase (EAL domain).
  
 0.790
Bphy_5184
KEGG: bvi:Bcep1808_5667 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 0.663
Bphy_0132
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sus:Acid_0530 putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
 
 0.660
Bphy_0546
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: bxe:Bxe_A0778 putative diguanylate phosphodiesterase (EAL domain).
  
 0.608
Bphy_4272
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: pca:Pcar_2558 signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
0.584
Bphy_5407
KEGG: bxe:Bxe_A1835 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.559
Bphy_4749
KEGG: bxe:Bxe_A1835 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.556
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.