STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI60984.1Glycine betaine/L-proline transport ATP-binding protein proV. (422 aa)    
Predicted Functional Partners:
ABI60982.1
Glycine betaine/L-proline transport system binding protein proX.
 
 0.999
ABI60983.1
Glycine betaine/L-proline transport system permease protein proW.
 0.999
ABI62814.1
Daunorubicin resistance ATP-binding protein drrA.
 
    
0.690
ABI62796.1
Sulfate transport system permease protein cysW.
 
      0.653
ABI61595.1
ABC transporter ATP-binding protein.
 
   
 
0.614
ABI61021.1
Transporter.
 
      0.606
ABI62099.1
ABC transporter ATP-binding protein.
 
     
0.571
ABI60981.1
Hypothetical protein.
       0.508
ABI62627.1
Nitrate binding protein nrtA.
 
      0.495
ABI61775.1
gln/Arg/Lys/His-binding protein and permease protein.
 
 
 
 0.477
Your Current Organism:
Granulibacter bethesdensis
NCBI taxonomy Id: 391165
Other names: G. bethesdensis CGDNIH1, Granulibacter bethesdensis CGDNIH1, Granulibacter bethesdensis str. CGDNIH1, Granulibacter bethesdensis strain CGDNIH1
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