STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI61664.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
ABI61663.1
Dihydropteroate synthase.
     0.966
ABI61660.1
Dihydroneopterin aldolase.
 
     0.956
ABI61661.1
Amino acid kinase family protein.
 
     0.950
ABI61662.1
Flavoprotein.
 
     0.948
ABI61669.1
citG family protein.
 
     0.805
ABI61674.1
Beta-ribofuranosylaminobenzene 5'-phosphate synthase.
 
     0.805
ABI61676.1
Tungsten-containing formylmethanofuran dehydrogenase, subunit B.
 
     0.800
ABI61672.1
Hypothetical protein.
 
     0.799
ABI61677.1
Tungsten-containing formylmethanofuran dehydrogenase, subunit A.
 
     0.799
ffsA
Formylmethanofuran--tetrahydromethanopterin formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
     0.794
Your Current Organism:
Granulibacter bethesdensis
NCBI taxonomy Id: 391165
Other names: G. bethesdensis CGDNIH1, Granulibacter bethesdensis CGDNIH1, Granulibacter bethesdensis str. CGDNIH1, Granulibacter bethesdensis strain CGDNIH1
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