STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI61967.1Hypothetical membrane spanning protein. (336 aa)    
Predicted Functional Partners:
ABI62366.1
Rod shape-determining protein mreD.
  
     0.632
ABI61362.1
Hypothetical membrane associated protein.
  
     0.599
ABI61597.1
Hypothetical protein.
  
     0.579
ABI61966.1
Hypothetical secreted protein.
       0.556
ABI61481.1
asmA family protein.
  
     0.555
ABI61968.1
Membrane-bound lytic murein transglycosylase B.
       0.543
rlpA
Lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
       0.543
ABI61970.1
D-alanyl-D-alanine serine-type carboxypeptidase; Belongs to the peptidase S11 family.
       0.543
ABI61981.1
Hypothetical secreted protein.
  
     0.481
ABI61971.1
Transcriptional regulator, TetR family.
       0.454
Your Current Organism:
Granulibacter bethesdensis
NCBI taxonomy Id: 391165
Other names: G. bethesdensis CGDNIH1, Granulibacter bethesdensis CGDNIH1, Granulibacter bethesdensis str. CGDNIH1, Granulibacter bethesdensis strain CGDNIH1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.