STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI62571.1Rrf2 family protein. (141 aa)    
Predicted Functional Partners:
ABI62572.1
Flavohemoprotein; Dihydropteridine reductase; Nitric oxide dioxygenase.
 
   
 0.848
ABI62224.1
Rrf2 family protein.
  
   
 0.788
ABI62841.1
Selenocysteine lyase.
  
  
 0.461
ABI62842.1
Selenocysteine lyase.
  
  
 0.461
ABI62219.1
iscU protein.
  
  
 0.400
Your Current Organism:
Granulibacter bethesdensis
NCBI taxonomy Id: 391165
Other names: G. bethesdensis CGDNIH1, Granulibacter bethesdensis CGDNIH1, Granulibacter bethesdensis str. CGDNIH1, Granulibacter bethesdensis strain CGDNIH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.