STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI63089.1Universal stress protein family. (287 aa)    
Predicted Functional Partners:
ABI63091.1
xaa-Pro aminopeptidase.
       0.653
ABI63090.1
Hypothetical cytosolic protein.
       0.645
ABI61256.1
Hypothetical protein.
  
     0.614
ABI63206.1
Hypothetical cytosolic protein.
  
     0.614
ABI61980.1
MotA/TolQ/ExbB proton channel family.
  
     0.568
ABI62882.1
Lipopolysaccharide core biosynthesis glycosyl transferase lpsD.
  
   
 0.522
ABI61030.1
Cell division protein ftsX.
  
     0.519
ABI61346.1
Na+/H+ antiporter nhaP.
  
  
 0.516
ABI62157.1
Hypothetical protein.
  
    0.513
ABI61481.1
asmA family protein.
  
     0.500
Your Current Organism:
Granulibacter bethesdensis
NCBI taxonomy Id: 391165
Other names: G. bethesdensis CGDNIH1, Granulibacter bethesdensis CGDNIH1, Granulibacter bethesdensis str. CGDNIH1, Granulibacter bethesdensis strain CGDNIH1
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