STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111138800SLAM family member 7. (338 aa)    
Predicted Functional Partners:
LOC111138949
Natural killer cell receptor 2B4 isoform X2.
   
 0.636
LOC111160959
Fanconi anemia group M protein.
   
 0.521
LOC111157292
SH2 domain-containing protein 1A isoform X1.
   
 0.515
LOC111155310
Survival motor neuron protein.
    
 0.490
LOC111160794
DNA polymerase.
   
 0.489
LOC111150168
Crossover junction endonuclease MUS81 isoform X1.
    
 0.481
LOC111160804
Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.
    
 0.443
LOC111157063
DNA polymerase delta subunit 2 isoform X3.
    
 0.437
LOC111157059
DNA polymerase delta subunit 2 isoform X1.
    
 0.437
LOC111138923
SLAM family member 8 isoform X1.
   
 
0.430
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.