STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111140750LOW QUALITY PROTEIN: homeobox protein CDX-1. (265 aa)    
Predicted Functional Partners:
LOC111146661
Cadherin-17.
   
  
 0.703
LOC111143793
Enhancer of polycomb homolog.
      
 0.618
LOC111155753
Trefoil factor 3.
      
 0.546
LOC111147863
Protein TFG.
    
 
 0.521
LOC111149511
Membrane-spanning 4-domains subfamily A member 12.
      
 0.511
LOC111154120
Lymphoid enhancer-binding factor 1 isoform X1.
    
 
 0.496
LOC111143704
Regenerating islet-derived protein 4.
   
  
 0.466
LOC111144668
Fibroblast growth factor-binding protein 3.
      
 0.441
LOC111151247
Hexosyltransferase.
      
 0.441
LOC111158088
Axin-2 isoform X1.
      
 0.441
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.