STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111148413Zinc finger CCHC domain-containing protein 9. (271 aa)    
Predicted Functional Partners:
LOC111146128
RNA exonuclease 4 isoform X1.
   
   0.693
LOC111160931
Zinc finger CCHC domain-containing protein 13 isoform X1.
      
 0.639
LOC111149052
Tyrosine-protein kinase.
    
 
 0.630
LOC111161674
LOW QUALITY PROTEIN: MPN domain-containing protein.
   
 
 0.613
LOC111152652
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
 
 0.570
LOC111153144
U3 small nucleolar ribonucleoprotein protein IMP3.
   
 
 0.570
LOC111154255
Exosome complex component RRP45 isoform X1.
   
 
 0.558
LOC111152848
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
    0.542
LOC111156866
Superkiller viralicidic activity 2-like 2.
   
 
 0.524
LOC111143552
Olfactory receptor 2A12-like.
      
 0.514
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.