Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111139261 | LOC111146983 | A0A2Y9IFU1 | A0A2Y9JBU8 | RNA demethylase ALKBH5. | Zinc finger CCCH domain-containing protein 13 isoform X1. | 0.726 |
LOC111139261 | LOC111149053 | A0A2Y9IFU1 | A0A2Y9JKQ7 | RNA demethylase ALKBH5. | YTH domain-containing protein 1 isoform X1. | 0.733 |
LOC111139261 | LOC111153177 | A0A2Y9IFU1 | A0A2Y9K3C1 | RNA demethylase ALKBH5. | Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. | 0.619 |
LOC111139261 | LOC111157349 | A0A2Y9IFU1 | A0A2Y9KYZ6 | RNA demethylase ALKBH5. | N6-adenosine-methyltransferase subunit METTL14 isoform X1; Belongs to the MT-A70-like family. | 0.782 |
LOC111139261 | LOC111158696 | A0A2Y9IFU1 | A0A2Y9KRH5 | RNA demethylase ALKBH5. | pre-mRNA-splicing regulator WTAP. | 0.911 |
LOC111141740 | LOC111146725 | A0A2Y9IPT7 | A0A2Y9JAR2 | Cleavage stimulation factor subunit 1. | Cleavage and polyadenylation specificity factor subunit 1. | 0.876 |
LOC111141740 | LOC111148694 | A0A2Y9IPT7 | A0A2Y9JTU1 | Cleavage stimulation factor subunit 1. | Cleavage and polyadenylation specificity factor subunit 2. | 0.989 |
LOC111141740 | LOC111149053 | A0A2Y9IPT7 | A0A2Y9JKQ7 | Cleavage stimulation factor subunit 1. | YTH domain-containing protein 1 isoform X1. | 0.773 |
LOC111141740 | LOC111149507 | A0A2Y9IPT7 | A0A2Y9JNV6 | Cleavage stimulation factor subunit 1. | Cleavage stimulation factor subunit 3. | 0.999 |
LOC111141740 | LOC111157351 | A0A2Y9IPT7 | A0A2Y9KT06 | Cleavage stimulation factor subunit 1. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.837 |
LOC111146725 | LOC111141740 | A0A2Y9JAR2 | A0A2Y9IPT7 | Cleavage and polyadenylation specificity factor subunit 1. | Cleavage stimulation factor subunit 1. | 0.876 |
LOC111146725 | LOC111148694 | A0A2Y9JAR2 | A0A2Y9JTU1 | Cleavage and polyadenylation specificity factor subunit 1. | Cleavage and polyadenylation specificity factor subunit 2. | 0.999 |
LOC111146725 | LOC111149053 | A0A2Y9JAR2 | A0A2Y9JKQ7 | Cleavage and polyadenylation specificity factor subunit 1. | YTH domain-containing protein 1 isoform X1. | 0.758 |
LOC111146725 | LOC111149507 | A0A2Y9JAR2 | A0A2Y9JNV6 | Cleavage and polyadenylation specificity factor subunit 1. | Cleavage stimulation factor subunit 3. | 0.989 |
LOC111146725 | LOC111157351 | A0A2Y9JAR2 | A0A2Y9KT06 | Cleavage and polyadenylation specificity factor subunit 1. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.762 |
LOC111146983 | LOC111139261 | A0A2Y9JBU8 | A0A2Y9IFU1 | Zinc finger CCCH domain-containing protein 13 isoform X1. | RNA demethylase ALKBH5. | 0.726 |
LOC111146983 | LOC111149053 | A0A2Y9JBU8 | A0A2Y9JKQ7 | Zinc finger CCCH domain-containing protein 13 isoform X1. | YTH domain-containing protein 1 isoform X1. | 0.752 |
LOC111146983 | LOC111153177 | A0A2Y9JBU8 | A0A2Y9K3C1 | Zinc finger CCCH domain-containing protein 13 isoform X1. | Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. | 0.661 |
LOC111146983 | LOC111157349 | A0A2Y9JBU8 | A0A2Y9KYZ6 | Zinc finger CCCH domain-containing protein 13 isoform X1. | N6-adenosine-methyltransferase subunit METTL14 isoform X1; Belongs to the MT-A70-like family. | 0.963 |
LOC111146983 | LOC111157351 | A0A2Y9JBU8 | A0A2Y9KT06 | Zinc finger CCCH domain-containing protein 13 isoform X1. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.596 |
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