STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111151180Coiled-coil domain-containing protein 54. (328 aa)    
Predicted Functional Partners:
LOC111141256
Transcription factor SOX-30 isoform X1.
      
 0.583
LOC111142829
Transmembrane and coiled-coil domain-containing protein 2.
   
  
 0.541
LOC111144702
Spermatid nuclear transition protein 1.
   
  
 0.538
LOC111149191
Calcium-binding and spermatid-specific protein 1.
   
  
 0.524
LOC111153139
Disintegrin and metalloproteinase domain-containing protein 29.
   
  
 0.521
LOC111144611
Disintegrin and metalloproteinase domain-containing protein 2.
   
  
 0.517
LOC111141819
Protein FAM209B.
      
 0.511
LOC111151907
Protein FAM71F1.
      
 0.511
LOC111157203
Kita-kyushu lung cancer antigen 1.
      
 0.510
LOC111158662
Probable tubulin polyglutamylase TTLL2.
      
 0.495
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.