STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111149660Zinc finger HIT domain-containing protein 2. (397 aa)    
Predicted Functional Partners:
LOC111141841
Protein AAR2 homolog.
    
 
 0.795
LOC111149751
Protein TSSC4.
   
 
 0.768
LOC111158070
116 kDa U5 small nuclear ribonucleoprotein component.
    
 
 0.744
LOC111152172
Prefoldin subunit 6.
   
  
 0.638
LOC111150794
Neudesin; Belongs to the cytochrome b5 family.
      
 0.634
LOC111157979
RNA polymerase II-associated protein 3 isoform X1.
   
 
 0.632
LOC111143597
Box C/D snoRNA protein 1 isoform X1.
    
 
 0.631
LOC111143556
U5 small nuclear ribonucleoprotein 40 kDa protein.
    
 
 0.631
LOC111159085
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.631
LOC111158484
Tetratricopeptide repeat protein 27 isoform X1.
    
 
 0.629
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.