STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111151343Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)    
Predicted Functional Partners:
LOC111151753
Vacuolar protein-sorting-associated protein 25.
   
 0.998
LOC111147061
Vacuolar protein-sorting-associated protein 36 isoform X1.
   
 0.997
LOC111160447
Charged multivesicular body protein 6 isoform X1.
    
 0.949
LOC111146800
Vacuolar protein sorting-associated protein 28 homolog isoform X1; Belongs to the VPS28 family.
   
 0.913
LOC111151719
Protein Njmu-R1 isoform X1.
    
 0.894
LOC111139872
Charged multivesicular body protein 2a.
   
 0.885
LOC111149860
Vacuolar protein sorting-associated protein 37C.
     
 0.855
LOC111141848
Charged multivesicular body protein 4b.
    
 0.832
LOC111156838
Charged multivesicular body protein 4c.
    
 0.832
LOC111156552
Vacuolar protein sorting-associated protein 37B.
     
 0.820
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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