STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111154719TAR DNA-binding protein 43 isoform X2. (302 aa)    
Predicted Functional Partners:
LOC111162225
RNA-binding protein FUS isoform X1.
   
 0.784
LOC111155976
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.766
LOC111151426
Serine/arginine-rich splicing factor 1.
   
 0.764
LOC111153533
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.760
LOC111139619
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.724
LOC111148658
Homeobox protein goosecoid.
    
   0.711
LOC111160408
BTB/POZ domain-containing protein KCTD2.
   
  0.696
LOC111155698
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
  
 0.689
LOC111159865
Guanine nucleotide exchange C9orf72 homolog.
      
 0.686
LOC111161812
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 0.684
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.