STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111157061nudC domain-containing protein 3. (356 aa)    
Predicted Functional Partners:
LOC111157643
GTP-binding protein 1.
      
 0.803
LOC111162226
Ubiquitin domain-containing protein UBFD1 isoform X1.
   
  
 0.761
LOC111160173
Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform X1.
   
  
 0.748
LOC111155833
LOW QUALITY PROTEIN: E3 SUMO-protein ligase RanBP2-like.
   
 0.746
LOC111156230
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase isoform X1.
      
 0.740
LOC111141572
GPI transamidase component PIG-T isoform X1.
      
 0.679
LOC111141549
PHD finger protein 20.
   
  
 0.623
LOC111161746
ATP-dependent Clp protease proteolytic subunit.
   
  
 0.619
LOC111151396
Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...]
   
 0.591
LOC111155084
Shugoshin 1.
   
 0.589
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.