STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111158199EF-hand calcium-binding domain-containing protein 13. (939 aa)    
Predicted Functional Partners:
LOC111140840
Calcium/calmodulin-dependent protein kinase type II subunit alpha; Belongs to the protein kinase superfamily.
   
 0.667
LOC111153485
Calcium/calmodulin-dependent protein kinase type II subunit delta isoform X3.
   
 0.667
LOC111156985
Calcium/calmodulin-dependent protein kinase type II subunit beta.
   
 0.667
LOC111150467
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
    
 0.649
LOC111141449
Peptidylprolyl isomerase.
   
 0.633
LOC111154143
Peptidylprolyl isomerase.
   
 0.633
LOC111149772
Potassium voltage-gated channel subfamily KQT member 1; Belongs to the potassium channel family.
    
 0.630
LOC111151265
Unconventional myosin-Ic isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.622
LOC111138737
Peptidyl-prolyl cis-trans isomerase FKBP3 isoform X1.
   
 0.612
LOC111148267
Calcium/calmodulin-dependent protein kinase type IV; Belongs to the protein kinase superfamily.
   
 0.601
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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