STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111160136Ras-related protein Rab-5B isoform X1. (215 aa)    
Predicted Functional Partners:
LOC111142649
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.953
LOC111149738
Ras and Rab interactor 1.
    
 0.929
LOC111145654
Rab5 GDP/GTP exchange factor isoform X1.
   
 0.899
LOC111142206
Early endosome antigen 1 isoform X1.
    
 0.875
LOC111144109
Rabenosyn-5 isoform X1.
   
 0.764
LOC111142171
DCC-interacting protein 13-beta isoform X2.
   
 
 0.762
LOC111143849
DCC-interacting protein 13-alpha.
   
 
 0.759
LOC111161108
Rab GTPase-binding effector protein 1 isoform X1.
    
 0.700
LOC111148815
cyclin-G-associated kinase isoform X1.
   
 0.683
LOC111161208
Rabankyrin-5.
   
 0.664
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.