STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111161536Calpain-12; Belongs to the peptidase C2 family. (722 aa)    
Predicted Functional Partners:
LOC111148454
Calpastatin isoform X1.
   
 0.716
LOC111160095
Calcium-binding protein 7.
   
 
 0.713
LOC111157358
Calpain small subunit 2.
   
0.658
LOC111161509
Calpain small subunit 1.
   
0.658
LOC111151765
Rhomboid-related protein 3; Belongs to the peptidase S54 family.
   
 
 0.559
LOC111154052
Intersectin-2 isoform X1.
   
 
  0.546
LOC111147965
Ankyrin repeat and SOCS box protein 3 isoform X1.
   
 0.496
LOC111149466
Anoctamin.
   
  
 0.451
LOC111152100
Leucine-rich repeat and guanylate kinase domain-containing protein.
   
 
 0.448
LOC111144883
Tumor necrosis factor receptor superfamily member 6.
   
  
 0.442
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.