STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111160746RNA-binding protein Nova-2. (492 aa)    
Predicted Functional Partners:
LOC111156504
Serine/arginine repetitive matrix protein 4.
      
 0.516
LOC111152647
RNA-binding protein MEX3B.
    
 
 0.485
LOC111142780
Polypyrimidine tract-binding protein 2.
    
 
 0.464
LOC111142426
CUGBP Elav-like family member 4 isoform X1.
   
  
 0.451
LOC111161975
CUGBP Elav-like family member 3 isoform X1.
   
  
 0.451
LOC111161110
Netrin-1.
      
 0.445
LOC111161008
Disks large homolog 3 isoform X2; Belongs to the MAGUK family.
      
 0.441
LOC111162327
Serine protease 53; Belongs to the peptidase S1 family.
      
 0.441
LOC111145697
Dynamin-1 isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.434
LOC111154720
Agrin isoform X2.
      
 0.430
Your Current Organism:
Enhydra lutris
NCBI taxonomy Id: 391180
Other names: E. lutris kenyoni, Enhydra lutris kenyoni
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