STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP89480.1ABC-type antimicrobial peptide transport system, ATPase component. (137 aa)    
Predicted Functional Partners:
ABP89483.1
ABC-type antimicrobial peptide transport system, permease component.
 
 0.998
ABP89481.1
ABC-type antimicrobial peptide transport system, ATPase component.
     0.994
ABP89482.1
ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.983
ABP89479.1
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.974
ABP90346.1
ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.734
ABP90559.1
ABC transporter membrane-spanning permease - unknown substrate.
  
 
 0.702
ABP89477.1
Hypothetical protein.
       0.558
ABP89478.1
Glutathione reductase.
       0.558
ABP89854.1
ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.542
ABP89855.1
ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.542
Your Current Organism:
Streptococcus suis 05ZYH33
NCBI taxonomy Id: 391295
Other names: S. suis 05ZYH33, Streptococcus suis str. 05ZYH33, Streptococcus suis strain 05ZYH33
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