STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP89539.1Cps2J. (332 aa)    
Predicted Functional Partners:
ABP89540.1
Glycosyltransferases involved in cell wall biogenesis.
 
    
0.830
ABP89534.1
Cps2E.
 
  
 0.825
ABP89538.1
Cps2I.
     
 0.805
ABP89537.1
Cps2H.
     
 0.735
ABP89535.1
Cps2F.
  
  
 0.723
ABP89532.1
Cps2C.
 
  
 0.626
ABP89533.1
Cps2D.
     
 0.536
ABP89531.1
Cps2B.
  
  
 0.447
rqcH
Fibronectin/fibrinogen binding protein; Part of the ribosome quality control system (RQC). Recruits Ala-charged tRNA and directs the elongation of stalled nascent chains on 50S ribosomal subunits, leading to non-templated C-terminal Ala extensions (Ala tail). The Ala tail promotes nascent chain degradation. May add between 1 and at least 8 Ala residues. Binds to stalled 50S ribosomal subunits.
   
  
 0.444
ABP89530.1
Cps2A.
     
 0.409
Your Current Organism:
Streptococcus suis 05ZYH33
NCBI taxonomy Id: 391295
Other names: S. suis 05ZYH33, Streptococcus suis str. 05ZYH33, Streptococcus suis strain 05ZYH33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.