Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABP89249.1 | ABP89768.1 | SSU05_0281 | SSU05_0801 | Threonine synthase. | Homoserine dehydrogenase. | 0.913 |
ABP89249.1 | ABP90777.1 | SSU05_0281 | SSU05_1811 | Threonine synthase. | Aspartokinase; Belongs to the aspartokinase family. | 0.769 |
ABP89249.1 | asd | SSU05_0281 | SSU05_0718 | Threonine synthase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.631 |
ABP89249.1 | dapA | SSU05_0281 | SSU05_0719 | Threonine synthase. | Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.400 |
ABP89249.1 | thrB | SSU05_0281 | SSU05_0803 | Threonine synthase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.998 |
ABP89733.1 | ABP89768.1 | SSU05_0767 | SSU05_0801 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Homoserine dehydrogenase. | 0.880 |
ABP89733.1 | ABP90528.1 | SSU05_0767 | SSU05_1562 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Cystathionine beta-lyases/cystathionine gamma-synthase. | 0.923 |
ABP89733.1 | thrB | SSU05_0767 | SSU05_0803 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.860 |
ABP89768.1 | ABP89249.1 | SSU05_0801 | SSU05_0281 | Homoserine dehydrogenase. | Threonine synthase. | 0.913 |
ABP89768.1 | ABP89733.1 | SSU05_0801 | SSU05_0767 | Homoserine dehydrogenase. | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.880 |
ABP89768.1 | ABP89999.1 | SSU05_0801 | SSU05_1033 | Homoserine dehydrogenase. | O-acetylhomoserine sulfhydrylase. | 0.872 |
ABP89768.1 | ABP90286.1 | SSU05_0801 | SSU05_1320 | Homoserine dehydrogenase. | Conserved hypothetical protein. | 0.859 |
ABP89768.1 | ABP90528.1 | SSU05_0801 | SSU05_1562 | Homoserine dehydrogenase. | Cystathionine beta-lyases/cystathionine gamma-synthase. | 0.904 |
ABP89768.1 | ABP90777.1 | SSU05_0801 | SSU05_1811 | Homoserine dehydrogenase. | Aspartokinase; Belongs to the aspartokinase family. | 0.942 |
ABP89768.1 | asd | SSU05_0801 | SSU05_0718 | Homoserine dehydrogenase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.972 |
ABP89768.1 | dapA | SSU05_0801 | SSU05_0719 | Homoserine dehydrogenase. | Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.950 |
ABP89768.1 | metAA | SSU05_0801 | SSU05_1306 | Homoserine dehydrogenase. | Homoserine trans-succinylase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.946 |
ABP89768.1 | thrB | SSU05_0801 | SSU05_0803 | Homoserine dehydrogenase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.997 |
ABP89999.1 | ABP89768.1 | SSU05_1033 | SSU05_0801 | O-acetylhomoserine sulfhydrylase. | Homoserine dehydrogenase. | 0.872 |
ABP89999.1 | ABP90286.1 | SSU05_1033 | SSU05_1320 | O-acetylhomoserine sulfhydrylase. | Conserved hypothetical protein. | 0.925 |
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