Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABP89494.1 | ABP90099.1 | SSU05_0528 | SSU05_1133 | DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Predicted membrane protein. | 0.404 |
ABP89494.1 | ABP90100.1 | SSU05_0528 | SSU05_1134 | DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.404 |
ABP89885.1 | ABP90099.1 | SSU05_0919 | SSU05_1133 | Hypothetical protein. | Predicted membrane protein. | 0.404 |
ABP89885.1 | ABP90100.1 | SSU05_0919 | SSU05_1134 | Hypothetical protein. | Hypothetical protein. | 0.404 |
ABP90096.1 | ABP90097.1 | SSU05_1130 | SSU05_1131 | Predicted permease. | Predicted transcriptional regulator. | 0.548 |
ABP90096.1 | ABP90098.1 | SSU05_1130 | SSU05_1132 | Predicted permease. | Predicted membrane protein. | 0.532 |
ABP90096.1 | ABP90099.1 | SSU05_1130 | SSU05_1133 | Predicted permease. | Predicted membrane protein. | 0.528 |
ABP90096.1 | ABP90100.1 | SSU05_1130 | SSU05_1134 | Predicted permease. | Hypothetical protein. | 0.528 |
ABP90097.1 | ABP90096.1 | SSU05_1131 | SSU05_1130 | Predicted transcriptional regulator. | Predicted permease. | 0.548 |
ABP90097.1 | ABP90098.1 | SSU05_1131 | SSU05_1132 | Predicted transcriptional regulator. | Predicted membrane protein. | 0.799 |
ABP90097.1 | ABP90099.1 | SSU05_1131 | SSU05_1133 | Predicted transcriptional regulator. | Predicted membrane protein. | 0.938 |
ABP90097.1 | ABP90100.1 | SSU05_1131 | SSU05_1134 | Predicted transcriptional regulator. | Hypothetical protein. | 0.768 |
ABP90098.1 | ABP90096.1 | SSU05_1132 | SSU05_1130 | Predicted membrane protein. | Predicted permease. | 0.532 |
ABP90098.1 | ABP90097.1 | SSU05_1132 | SSU05_1131 | Predicted membrane protein. | Predicted transcriptional regulator. | 0.799 |
ABP90098.1 | ABP90099.1 | SSU05_1132 | SSU05_1133 | Predicted membrane protein. | Predicted membrane protein. | 0.763 |
ABP90098.1 | ABP90100.1 | SSU05_1132 | SSU05_1134 | Predicted membrane protein. | Hypothetical protein. | 0.763 |
ABP90099.1 | ABP89494.1 | SSU05_1133 | SSU05_0528 | Predicted membrane protein. | DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.404 |
ABP90099.1 | ABP89885.1 | SSU05_1133 | SSU05_0919 | Predicted membrane protein. | Hypothetical protein. | 0.404 |
ABP90099.1 | ABP90096.1 | SSU05_1133 | SSU05_1130 | Predicted membrane protein. | Predicted permease. | 0.528 |
ABP90099.1 | ABP90097.1 | SSU05_1133 | SSU05_1131 | Predicted membrane protein. | Predicted transcriptional regulator. | 0.938 |
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