Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABP89314.1 | ABP89820.1 | SSU05_0347 | SSU05_0854 | Uncharacterized protein conserved in bacteria. | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | 0.768 |
ABP89314.1 | ABP90242.1 | SSU05_0347 | SSU05_1276 | Uncharacterized protein conserved in bacteria. | Uncharacterized conserved protein. | 0.688 |
ABP89314.1 | ABP90248.1 | SSU05_0347 | SSU05_1282 | Uncharacterized protein conserved in bacteria. | Predicted membrane protein. | 0.446 |
ABP89314.1 | ABP90401.1 | SSU05_0347 | SSU05_1435 | Uncharacterized protein conserved in bacteria. | Predicted sugar phosphatases of the HAD superfamily. | 0.726 |
ABP89820.1 | ABP89314.1 | SSU05_0854 | SSU05_0347 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | Uncharacterized protein conserved in bacteria. | 0.768 |
ABP89820.1 | ABP90242.1 | SSU05_0854 | SSU05_1276 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | Uncharacterized conserved protein. | 0.567 |
ABP89820.1 | ABP90401.1 | SSU05_0854 | SSU05_1435 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | Predicted sugar phosphatases of the HAD superfamily. | 0.644 |
ABP90241.1 | ABP90242.1 | SSU05_1275 | SSU05_1276 | Glycosyltransferases involved in cell wall biogenesis. | Uncharacterized conserved protein. | 0.871 |
ABP90241.1 | ABP90243.1 | SSU05_1275 | SSU05_1277 | Glycosyltransferases involved in cell wall biogenesis. | Glycosyltransferases involved in cell wall biogenesis. | 0.938 |
ABP90241.1 | ABP90245.1 | SSU05_1275 | SSU05_1279 | Glycosyltransferases involved in cell wall biogenesis. | Lipopolysaccharide biosynthesis protein. | 0.610 |
ABP90241.1 | ABP90247.1 | SSU05_1275 | SSU05_1281 | Glycosyltransferases involved in cell wall biogenesis. | Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | 0.627 |
ABP90241.1 | ABP90248.1 | SSU05_1275 | SSU05_1282 | Glycosyltransferases involved in cell wall biogenesis. | Predicted membrane protein. | 0.833 |
ABP90241.1 | ABP90250.1 | SSU05_1275 | SSU05_1284 | Glycosyltransferases involved in cell wall biogenesis. | Polysaccharide/teichoic acid transporter, putative. | 0.833 |
ABP90242.1 | ABP89314.1 | SSU05_1276 | SSU05_0347 | Uncharacterized conserved protein. | Uncharacterized protein conserved in bacteria. | 0.688 |
ABP90242.1 | ABP89820.1 | SSU05_1276 | SSU05_0854 | Uncharacterized conserved protein. | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | 0.567 |
ABP90242.1 | ABP90241.1 | SSU05_1276 | SSU05_1275 | Uncharacterized conserved protein. | Glycosyltransferases involved in cell wall biogenesis. | 0.871 |
ABP90242.1 | ABP90243.1 | SSU05_1276 | SSU05_1277 | Uncharacterized conserved protein. | Glycosyltransferases involved in cell wall biogenesis. | 0.914 |
ABP90242.1 | ABP90245.1 | SSU05_1276 | SSU05_1279 | Uncharacterized conserved protein. | Lipopolysaccharide biosynthesis protein. | 0.564 |
ABP90242.1 | ABP90247.1 | SSU05_1276 | SSU05_1281 | Uncharacterized conserved protein. | Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | 0.566 |
ABP90242.1 | ABP90248.1 | SSU05_1276 | SSU05_1282 | Uncharacterized conserved protein. | Predicted membrane protein. | 0.703 |
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