A0A0L9TNH0 protein (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0L9TNH0

Bromo domain-containing protein. (589 aa)

Predicted Functional Partners:

A0A0L9UAU7

0.593

A0A0L9V1D8

0.567

A0A0L9TTR7

0.554

A0A0L9UGE6

0.478

A0A0L9T8L2

0.426

A0A0L9TF02

0.426

A0A0L9VFA1

0.425

A0A0L9VPP4

0.425

A0A0L9TY02

0.415

A0A0L9TRS7

0.409

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9T8L2	A0A0L9TNH0	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Bromo domain-containing protein.	0.426
A0A0L9T8L2	A0A0L9TTR7	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.934
A0A0L9TF02	A0A0L9TNH0	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Bromo domain-containing protein.	0.426
A0A0L9TF02	A0A0L9TTR7	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	Uncharacterized protein.	0.934
A0A0L9TNH0	A0A0L9T8L2	Bromo domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.426
A0A0L9TNH0	A0A0L9TF02	Bromo domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.426
A0A0L9TNH0	A0A0L9TRS7	Bromo domain-containing protein.	Uncharacterized protein.	0.409
A0A0L9TNH0	A0A0L9TTR7	Bromo domain-containing protein.	Uncharacterized protein.	0.554
A0A0L9TNH0	A0A0L9TY02	Bromo domain-containing protein.	Uncharacterized protein.	0.415
A0A0L9TNH0	A0A0L9UAU7	Bromo domain-containing protein.	Asparagine synthetase [glutamine-hydrolyzing].	0.593
A0A0L9TNH0	A0A0L9UGE6	Bromo domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.478
A0A0L9TNH0	A0A0L9V1D8	Bromo domain-containing protein.	TAFII55_N domain-containing protein.	0.567
A0A0L9TNH0	A0A0L9VFA1	Bromo domain-containing protein.	Uncharacterized protein.	0.425
A0A0L9TNH0	A0A0L9VPP4	Bromo domain-containing protein.	Uncharacterized protein.	0.425
A0A0L9TRS7	A0A0L9TNH0	Uncharacterized protein.	Bromo domain-containing protein.	0.409
A0A0L9TRS7	A0A0L9VFA1	Uncharacterized protein.	Uncharacterized protein.	0.512
A0A0L9TTR7	A0A0L9T8L2	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.934
A0A0L9TTR7	A0A0L9TF02	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.934
A0A0L9TTR7	A0A0L9TNH0	Uncharacterized protein.	Bromo domain-containing protein.	0.554
A0A0L9TY02	A0A0L9TNH0	Uncharacterized protein.	Bromo domain-containing protein.	0.415