Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0L9TDF0 | A0A0L9TMW4 | DNA ligase. | RPOLD domain-containing protein. | 0.846 |
A0A0L9TDF0 | A0A0L9U4M9 | DNA ligase. | Uncharacterized protein. | 0.650 |
A0A0L9TDF0 | A0A0L9V2U6 | DNA ligase. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.756 |
A0A0L9TDF0 | A0A0L9V843 | DNA ligase. | RNA_pol_L_2 domain-containing protein. | 0.805 |
A0A0L9TDF0 | A0A0L9VCM8 | DNA ligase. | BSD domain-containing protein. | 0.764 |
A0A0L9TDF0 | A0A0L9VIJ8 | DNA ligase. | Uncharacterized protein. | 0.829 |
A0A0L9TDF0 | A0A0L9VU29 | DNA ligase. | RPOL4c domain-containing protein. | 0.804 |
A0A0L9TMW4 | A0A0L9TDF0 | RPOLD domain-containing protein. | DNA ligase. | 0.846 |
A0A0L9TMW4 | A0A0L9U4M9 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.726 |
A0A0L9TMW4 | A0A0L9UTP0 | RPOLD domain-containing protein. | Spt4 domain-containing protein. | 0.991 |
A0A0L9TMW4 | A0A0L9UXF2 | RPOLD domain-containing protein. | Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. | 0.975 |
A0A0L9TMW4 | A0A0L9V2U6 | RPOLD domain-containing protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.973 |
A0A0L9TMW4 | A0A0L9V843 | RPOLD domain-containing protein. | RNA_pol_L_2 domain-containing protein. | 0.992 |
A0A0L9TMW4 | A0A0L9VCM8 | RPOLD domain-containing protein. | BSD domain-containing protein. | 0.975 |
A0A0L9TMW4 | A0A0L9VIJ8 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.888 |
A0A0L9TMW4 | A0A0L9VQX5 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.987 |
A0A0L9TMW4 | A0A0L9VU29 | RPOLD domain-containing protein. | RPOL4c domain-containing protein. | 0.991 |
A0A0L9U4M9 | A0A0L9TDF0 | Uncharacterized protein. | DNA ligase. | 0.650 |
A0A0L9U4M9 | A0A0L9TMW4 | Uncharacterized protein. | RPOLD domain-containing protein. | 0.726 |
A0A0L9U4M9 | A0A0L9UTP0 | Uncharacterized protein. | Spt4 domain-containing protein. | 0.719 |
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