STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VaXTH2Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (293 aa)    
Predicted Functional Partners:
A0A0L9UV84
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.685
A0A0L9UJX3
Uncharacterized protein.
    
 
 0.681
A0A0L9TD44
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.552
A0A0L9V1T6
Uncharacterized protein.
   
 
 0.552
A0A0L9V2B0
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.552
A0A0L9UWU9
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 0.453
A0A0L9UUQ5
PSII_BNR domain-containing protein.
    
 0.401
A0A0L9V8T0
PSII_BNR domain-containing protein.
    
 0.401
Your Current Organism:
Vigna angularis
NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean
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