A0A0L9U851 protein (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0L9U851

Uncharacterized protein. (329 aa)

Predicted Functional Partners:

A0A0L9U6D0

0.774

A0A0L9T3F4

0.771

A0A0L9TTC4

0.771

A0A0L9TY17

0.771

A0A0L9U244

0.771

A0A0L9VJC6

0.771

A0A0L9T3S2

0.767

A0A0L9VU92

0.763

A0A0L9TZ56

0.751

A0A0L9TTR7

0.742

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9T3F4	A0A0L9T3S2	Uncharacterized protein.	Histone domain-containing protein.	0.643
A0A0L9T3F4	A0A0L9U851	Uncharacterized protein.	Uncharacterized protein.	0.771
A0A0L9T3S2	A0A0L9T3F4	Histone domain-containing protein.	Uncharacterized protein.	0.643
A0A0L9T3S2	A0A0L9TTC4	Histone domain-containing protein.	Uncharacterized protein.	0.588
A0A0L9T3S2	A0A0L9TTR7	Histone domain-containing protein.	Uncharacterized protein.	0.899
A0A0L9T3S2	A0A0L9TY17	Histone domain-containing protein.	Uncharacterized protein.	0.588
A0A0L9T3S2	A0A0L9U244	Histone domain-containing protein.	Uncharacterized protein.	0.643
A0A0L9T3S2	A0A0L9U6D0	Histone domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.436
A0A0L9T3S2	A0A0L9U851	Histone domain-containing protein.	Uncharacterized protein.	0.767
A0A0L9TTC4	A0A0L9T3S2	Uncharacterized protein.	Histone domain-containing protein.	0.588
A0A0L9TTC4	A0A0L9U851	Uncharacterized protein.	Uncharacterized protein.	0.771
A0A0L9TTR7	A0A0L9T3S2	Uncharacterized protein.	Histone domain-containing protein.	0.899
A0A0L9TTR7	A0A0L9U6D0	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.725
A0A0L9TTR7	A0A0L9U851	Uncharacterized protein.	Uncharacterized protein.	0.742
A0A0L9TY17	A0A0L9T3S2	Uncharacterized protein.	Histone domain-containing protein.	0.588
A0A0L9TY17	A0A0L9U851	Uncharacterized protein.	Uncharacterized protein.	0.771
A0A0L9TZ56	A0A0L9U6D0	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein; Belongs to the actin family.	0.811
A0A0L9TZ56	A0A0L9U851	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.751
A0A0L9TZ56	A0A0L9VU92	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.	0.583
A0A0L9U244	A0A0L9T3S2	Uncharacterized protein.	Histone domain-containing protein.	0.643