STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0L9VC95Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. (381 aa)    
Predicted Functional Partners:
A0A0L9U7Y3
Uncharacterized protein.
   
 0.926
A0A0L9VCG5
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.833
A0A0L9TPU5
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.754
A0A0L9TY16
Uncharacterized protein.
   
 0.754
A0A0L9V226
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.754
A0A0L9VSX1
Uncharacterized protein.
   
 0.754
A0A0L9UBR9
DUF1767 domain-containing protein.
    
 0.735
A0A0L9UI24
Uncharacterized protein.
   
 0.722
A0A0L9TZX7
Uncharacterized protein.
    
 
 0.700
A0A0L9VSJ2
Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family.
    
 
 0.700
Your Current Organism:
Vigna angularis
NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean
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