Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0L9TPU5 | A0A0L9UBR9 | AA_TRNA_LIGASE_II domain-containing protein. | DUF1767 domain-containing protein. | 0.497 |
A0A0L9TPU5 | A0A0L9UI24 | AA_TRNA_LIGASE_II domain-containing protein. | Uncharacterized protein. | 0.674 |
A0A0L9TPU5 | A0A0L9VC95 | AA_TRNA_LIGASE_II domain-containing protein. | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | 0.754 |
A0A0L9TPU5 | A0A0L9VCG5 | AA_TRNA_LIGASE_II domain-containing protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.748 |
A0A0L9TPU5 | A0A0L9VSX1 | AA_TRNA_LIGASE_II domain-containing protein. | Uncharacterized protein. | 0.903 |
A0A0L9TY16 | A0A0L9U7Y3 | Uncharacterized protein. | Uncharacterized protein. | 0.459 |
A0A0L9TY16 | A0A0L9UBR9 | Uncharacterized protein. | DUF1767 domain-containing protein. | 0.497 |
A0A0L9TY16 | A0A0L9UI24 | Uncharacterized protein. | Uncharacterized protein. | 0.674 |
A0A0L9TY16 | A0A0L9VC95 | Uncharacterized protein. | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | 0.754 |
A0A0L9TY16 | A0A0L9VCG5 | Uncharacterized protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.748 |
A0A0L9TZX7 | A0A0L9VC95 | Uncharacterized protein. | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | 0.700 |
A0A0L9U7Y3 | A0A0L9TY16 | Uncharacterized protein. | Uncharacterized protein. | 0.459 |
A0A0L9U7Y3 | A0A0L9UBR9 | Uncharacterized protein. | DUF1767 domain-containing protein. | 0.736 |
A0A0L9U7Y3 | A0A0L9UI24 | Uncharacterized protein. | Uncharacterized protein. | 0.977 |
A0A0L9U7Y3 | A0A0L9V226 | Uncharacterized protein. | AA_TRNA_LIGASE_II domain-containing protein. | 0.459 |
A0A0L9U7Y3 | A0A0L9VC95 | Uncharacterized protein. | Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family. | 0.926 |
A0A0L9U7Y3 | A0A0L9VCG5 | Uncharacterized protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.886 |
A0A0L9UBR9 | A0A0L9TPU5 | DUF1767 domain-containing protein. | AA_TRNA_LIGASE_II domain-containing protein. | 0.497 |
A0A0L9UBR9 | A0A0L9TY16 | DUF1767 domain-containing protein. | Uncharacterized protein. | 0.497 |
A0A0L9UBR9 | A0A0L9U7Y3 | DUF1767 domain-containing protein. | Uncharacterized protein. | 0.736 |
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