A0A0L9VMI0 protein (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0L9VMI0

Uncharacterized protein. (74 aa)

Predicted Functional Partners:

A0A0L9TET8

0.898

A0A0L9UAY2

0.898

A0A0L9UU21

0.558

A0A0L9TMR0

0.549

A0A0L9TZ40

0.546

A0A0L9U3B1

0.543

A0A0L9UTM7

0.528

A0A0L9VR87

0.520

A0A0L9U0W3

0.518

A0A0L9U9Y3

0.518

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9TET8	A0A0L9VMI0	BHLH domain-containing protein.	Uncharacterized protein.	0.898
A0A0L9TMR0	A0A0L9U0W3	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A0L9TMR0	A0A0L9U3B1	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A0L9TMR0	A0A0L9U9Y3	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.406
A0A0L9TMR0	A0A0L9UTM7	Uncharacterized protein.	Uncharacterized protein.	0.445
A0A0L9TMR0	A0A0L9UU21	Uncharacterized protein.	Uncharacterized protein.	0.466
A0A0L9TMR0	A0A0L9VMI0	Uncharacterized protein.	Uncharacterized protein.	0.549
A0A0L9TMR0	A0A0L9VR87	Uncharacterized protein.	Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.	0.429
A0A0L9TZ40	A0A0L9VMI0	Uncharacterized protein; Belongs to the peptidase M18 family.	Uncharacterized protein.	0.546
A0A0L9U0W3	A0A0L9TMR0	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A0L9U0W3	A0A0L9U3B1	Uncharacterized protein.	Uncharacterized protein.	0.514
A0A0L9U0W3	A0A0L9UTM7	Uncharacterized protein.	Uncharacterized protein.	0.469
A0A0L9U0W3	A0A0L9UU21	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A0L9U0W3	A0A0L9VMI0	Uncharacterized protein.	Uncharacterized protein.	0.518
A0A0L9U0W3	A0A0L9VR87	Uncharacterized protein.	Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.	0.480
A0A0L9U3B1	A0A0L9TMR0	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A0L9U3B1	A0A0L9U0W3	Uncharacterized protein.	Uncharacterized protein.	0.514
A0A0L9U3B1	A0A0L9U9Y3	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.493
A0A0L9U3B1	A0A0L9UTM7	Uncharacterized protein.	Uncharacterized protein.	0.507
A0A0L9U3B1	A0A0L9UU21	Uncharacterized protein.	Uncharacterized protein.	0.540