A0A0L9VS08 protein (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0L9VS08

Uncharacterized protein. (120 aa)

Predicted Functional Partners:

A0A0L9U2S5

0.995

A0A0L9TBE7

0.992

A0A0L9TIA8

0.992

A0A0L9TPW5

0.992

A0A0L9U1C0

0.992

A0A0L9VD76

0.992

A0A0L9T3U5

0.990

A0A0L9UVT8

0.990

A0A0L9T360

0.989

A0A0L9T4E1

0.989

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9T360	A0A0L9T3U5	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A0L9T360	A0A0L9T4E1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.988
A0A0L9T360	A0A0L9TBE7	Uncharacterized protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.900
A0A0L9T360	A0A0L9TIA8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.993
A0A0L9T360	A0A0L9TPW5	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A0L9T360	A0A0L9U1C0	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A0L9T360	A0A0L9U2S5	Uncharacterized protein.	Uncharacterized protein.	0.938
A0A0L9T360	A0A0L9UVT8	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A0L9T360	A0A0L9VD76	Uncharacterized protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.991
A0A0L9T360	A0A0L9VS08	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A0L9T3U5	A0A0L9T360	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A0L9T3U5	A0A0L9T4E1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.987
A0A0L9T3U5	A0A0L9TBE7	Uncharacterized protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.990
A0A0L9T3U5	A0A0L9TIA8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.994
A0A0L9T3U5	A0A0L9TPW5	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A0L9T3U5	A0A0L9U1C0	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A0L9T3U5	A0A0L9U2S5	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A0L9T3U5	A0A0L9VD76	Uncharacterized protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.992
A0A0L9T3U5	A0A0L9VS08	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A0L9T4E1	A0A0L9T360	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	Uncharacterized protein.	0.988