A0A0L9VTN2 protein (Vigna angularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0L9VTN2

TIR domain-containing protein. (231 aa)

Predicted Functional Partners:

A0A0L9VJZ8

0.489

A0A0L9TIA9

0.476

A0A0L9U210

0.472

A0A0L9TIT2

0.464

A0A0L9VPX7

0.460

A0A0L9VP34

0.459

A0A0L9TR95

0.451

A0A0L9TIJ1

0.449

A0A0L9TW45

0.446

A0A0L9UZY9

0.431

Your Current Organism:

Vigna angularis

NCBI taxonomy Id: 3914
Other names: Phaseolus angularis, V. angularis, Vigna angularis (Willd.) Ohwi & H.Ohashi, adzuki bean, azuki bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L9TIA9	A0A0L9VTN2	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	TIR domain-containing protein.	0.476
A0A0L9TIJ1	A0A0L9VTN2	TIR domain-containing protein.	TIR domain-containing protein.	0.449
A0A0L9TIT2	A0A0L9VTN2	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	TIR domain-containing protein.	0.464
A0A0L9TR95	A0A0L9VJZ8	Uncharacterized protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.434
A0A0L9TR95	A0A0L9VTN2	Uncharacterized protein.	TIR domain-containing protein.	0.451
A0A0L9TW45	A0A0L9VTN2	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	TIR domain-containing protein.	0.446
A0A0L9U210	A0A0L9VTN2	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	TIR domain-containing protein.	0.472
A0A0L9UZY9	A0A0L9VTN2	DUF4005 domain-containing protein.	TIR domain-containing protein.	0.431
A0A0L9VJZ8	A0A0L9TR95	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	Uncharacterized protein.	0.434
A0A0L9VJZ8	A0A0L9VTN2	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	TIR domain-containing protein.	0.489
A0A0L9VP34	A0A0L9VTN2	Uncharacterized protein.	TIR domain-containing protein.	0.459
A0A0L9VPX7	A0A0L9VTN2	Uncharacterized protein.	TIR domain-containing protein.	0.460
A0A0L9VTN2	A0A0L9TIA9	TIR domain-containing protein.	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.476
A0A0L9VTN2	A0A0L9TIJ1	TIR domain-containing protein.	TIR domain-containing protein.	0.449
A0A0L9VTN2	A0A0L9TIT2	TIR domain-containing protein.	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.464
A0A0L9VTN2	A0A0L9TR95	TIR domain-containing protein.	Uncharacterized protein.	0.451
A0A0L9VTN2	A0A0L9TW45	TIR domain-containing protein.	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.446
A0A0L9VTN2	A0A0L9U210	TIR domain-containing protein.	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.472
A0A0L9VTN2	A0A0L9UZY9	TIR domain-containing protein.	DUF4005 domain-containing protein.	0.431
A0A0L9VTN2	A0A0L9VJZ8	TIR domain-containing protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.489