STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94105.1Possible type II general secretion pathway (GSP) G protein. (140 aa)    
Predicted Functional Partners:
EDP94107.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
  0.947
EDP94108.1
Type II general secretion pathway (GSP) D protein; Belongs to the bacterial secretin family.
 
    0.899
EDP94641.1
COG1459 Type II secretory pathway, component PulF.
 
    0.861
EDP94447.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
  0.854
EDP94151.1
COG1459 Type II secretory pathway, component PulF.
 
    0.852
EDP94448.1
COG1450 Type II secretory pathway, component PulD.
 
    0.785
EDP96618.1
Putative cell wall-associated protein precursor.
  
     0.763
EDP94686.1
Cell well associated RhsD protein precursor; COG3209 Rhs family protein.
  
     0.760
EDP97305.1
Putative cell wall-associated protein precursor; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.760
EDP94442.1
Cell well associated RhsD protein precursor.
  
     0.758
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.