STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94772.1COG2207 AraC-type DNA-binding domain-containing proteins. (184 aa)    
Predicted Functional Partners:
EDP94770.1
Probable sensor protein (histidine protein kinase), acting on arcA; COG2202 FOG: PAS/PAC domain.
 
     0.887
EDP94771.1
Response regulator for gln (sensor glnL) (nitrogen regulator I, NRI); COG0784 FOG: CheY-like receiver.
 
     0.879
EDP94763.1
Two-component system sensor histidine kinase/response regulator, hybrid ('one component system').
 
     0.619
EDP94775.1
Transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.577
EDP94773.1
Permease.
       0.565
EDP94768.1
Hypothetical protein.
 
     0.511
EDP94774.1
Hypothetical protein; COG0628 Predicted permease.
 
     0.500
EDP94171.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.497
EDP95811.1
Transcriptional regulatory protein, AraC-type.
  
     0.449
EDP96284.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.