STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94796.1Glutamine synthetase; COG3968 Uncharacterized protein related to glutamine synthetase. (727 aa)    
Predicted Functional Partners:
EDP96667.1
COG0067 Glutamate synthase domain 1.
  
 
 0.958
EDP94795.1
COG0174 Glutamine synthetase.
    
 0.943
EDP94937.1
Gamma-glutamyltranspeptidase (ggt); COG0405 Gamma-glutamyltransferase.
 
  
  0.884
carA
COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
  
 
  0.874
EDP96666.1
Glutamate synthase, small subunit; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
    
 0.874
EDP96650.1
COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.872
EDP96891.1
Amidophosphoribosyltransferase; COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase.
    
  0.870
EDP94878.1
COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
     
 0.869
EDP94798.1
Putative phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase.
       0.500
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
  
 
 0.484
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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