STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94825.1Hypothetical protein; COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). (209 aa)    
Predicted Functional Partners:
EDP97722.1
SAM-dependent methyltransferase.
  
     0.553
EDP95545.1
Fibronectin type III domain protein.
  
     0.534
EDP94826.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.521
EDP98192.1
Hypothetical protein; COG1960 Acyl-CoA dehydrogenases.
  
     0.481
EDP95897.1
Hypothetical protein.
  
     0.461
EDP98270.1
Hypothetical protein.
  
     0.417
EDP98278.1
Hypothetical protein.
  
     0.415
EDP94211.1
Fibronectin type III domain protein; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.413
EDP94827.1
Hypothetical protein; COG2771 DNA-binding HTH domain-containing proteins.
       0.413
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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