STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94971.1COG3296 Uncharacterized protein conserved in bacteria. (154 aa)    
Predicted Functional Partners:
EDP94969.1
Hypothetical protein; COG1983 Putative stress-responsive transcriptional regulator.
  
    0.686
EDP94970.1
Hypothetical protein; COG1695 Predicted transcriptional regulators.
       0.565
EDP94968.1
Hypothetical protein.
  
    0.425
EDP96034.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.410
EDP95822.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.