STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP94990.1Hypothetical protein; COG1196 Chromosome segregation ATPases. (253 aa)    
Predicted Functional Partners:
EDP94989.1
Hypothetical protein.
 
     0.957
EDP94992.1
COG1300 Uncharacterized membrane protein.
 
     0.957
EDP94993.1
Putative transmembrane protein; COG1714 Predicted membrane protein/domain.
 
     0.918
EDP94987.1
Putative transmembrane protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
     0.887
EDP94991.1
Hypothetical protein; COG3639 ABC-type phosphate/phosphonate transport system, permease component.
  
    0.815
EDP94988.1
MoxR-like ATPase, possible regulator; COG0714 MoxR-like ATPases.
 
    0.749
EDP94994.1
yadS protein.
       0.615
EDP98005.1
Hypothetical protein.
 
     0.410
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.