STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP95009.1Hypothetical protein; COG4206 Outer membrane cobalamin receptor protein. (717 aa)    
Predicted Functional Partners:
EDP95019.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.804
EDP94541.1
SpoOJ regulator protein; COG1192 ATPases involved in chromosome partitioning.
    
   0.520
EDP97981.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
   0.520
EDP95006.1
COG3714 Predicted membrane protein.
       0.497
EDP95007.1
Hypothetical protein.
       0.497
EDP95008.1
Hypothetical protein; COG1988 Predicted membrane-bound metal-dependent hydrolases.
       0.497
EDP97259.1
Hypothetical protein; COG1292 Choline-glycine betaine transporter.
  
     0.495
EDP98355.1
Hypothetical protein; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit.
  
     0.489
EDP94981.1
tonB protein, putative.
    
   0.483
EDP98133.1
Hypothetical protein; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
    
   0.483
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.